Registry Zebrafish anatomy and development ontology

ZFA description.

Prefix
zfa
Preferred Prefix
ZFA
Alternative Prefixes
ZFA_RETIRED
Keywords
anatomy developmental biology life science obo ontology zebrafish
Version
2022-03-15
License
CC-BY-3.0
Links
Homepage Repository OBO OWL OBO JSON
Contact
Ceri Van Slyke   0000-0002-2244-7917   cerivs
Pattern for Local Unique Identifiers

Local identifiers in Zebrafish anatomy and development ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0005926   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Zebrafish anatomy and development ontology should match this regular expression:
^zfa:\d{7}$

Example CURIE
zfa:0005926
Publications
2014 The zebrafish anatomy and stage ontologies: representing the anatomy and development of Danio rerio.
Ontology
Appears In (1) (bioregistry.schema:0000018 )
ZP
Metaregistry Zebrafish anatomy and development ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for zfa with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl ZFA
BioContext biocontext ZFA
BioPortal BioPortal Prefixes logo bioportal ZFA
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.s3r6sk
OBO Foundry OBO Foundry logo obofoundry zfa
OLS Ontology Lookup Service logo ols zfa
OntoBee OntoBee logo ontobee ZFA
Prefix Commons Prefix Commons logo prefixcommons zfa
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE zfa:0005926 is used to demonstrate the provides available for zfa. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Zebrafish anatomy and development ontology zfa http://purl.obolibrary.org/obo/ZFA_0005926
Bioregistry bioregistry https://bioregistry.io/zfa:0005926
OBO Foundry obofoundry http://purl.obolibrary.org/obo/ZFA_0005926
Ontology Lookup Service ols https://www.ebi.ac.uk/ols/ontologies/zfa/terms?iri=http://purl.obolibrary.org/obo/ZFA_0005926
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/ZFA/?p=classes&conceptid=http://purl.obolibrary.org/obo/ZFA_0005926
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/zfa:0005926