appears_in: []
depends_on: []
deprecated: false
description: The International Nucleotide Sequence Database Collaboration (INSDC)
  consists of a joint effort to collect and disseminate databases containing DNA and
  RNA sequences.
example: X58356
homepage: https://www.ncbi.nlm.nih.gov/Genbank/
keywords:
- dna
mappings:
  biocontext: INSDC
  integbio: nbdc02567
  miriam: insdc
  n2t: insdc
  prefixcommons: insdc
  togoid: Insdc
name: Nucleotide Sequence Database
namespace_in_lui: false
pattern: ^([A-Z]\d{5}|[A-Z]{2}\d{6}|[A-Z]{4,6}\d{8,10}|[A-J][A-Z]{2}\d{5})(\.\d+)?$
preferred_prefix: insdc
prefix: insdc
providers:
- code: CURATOR_REVIEW
  description: INSDC through DDBJ
  homepage: http://www.ddbj.nig.ac.jp/
  name: INSDC through DDBJ
  uri_format: http://getentry.ddbj.nig.ac.jp/getentry?database=ddbj&accession_number=$1
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/insdc:$1
- code: ebi
  description: INSDC through European Nucleotide Archive (ENA)
  homepage: https://www.ebi.ac.uk/ena/
  name: INSDC through European Nucleotide Archive (ENA)
  uri_format: https://www.ebi.ac.uk/ena/data/view/$1
- code: ncbi
  description: INSDC through Nucleotide database at NCBI
  homepage: https://www.ncbi.nlm.nih.gov/nuccore/
  name: INSDC through Nucleotide database at NCBI
  uri_format: https://www.ncbi.nlm.nih.gov/nuccore/$1
publications:
- doi: 10.1093/nar/18.6.1517
  pmc: PMC330520
  pubmed: '2326192'
  title: Recent changes in the GenBank On-line Service
  year: 1990
- doi: 10.1093/nar/gkl986
  pmc: PMC1781245
  pubmed: '17202161'
  title: GenBank
  year: 2007
- doi: 10.1093/nar/gkl913
  pmc: PMC1897316
  pubmed: '17148479'
  title: EMBL Nucleotide Sequence Database in 2006
  year: 2006
- doi: 10.1126/science.298.5597.1333b
  pubmed: '12436968'
  title: Nucleotide sequence database policies
  year: 2002
synonyms: []
uri_format: https://www.ncbi.nlm.nih.gov/nuccore/$1
