The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Prefix
insdc
Keywords
dna
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Nucleotide Sequence Database should match this regular expression:
^([A-Z]\d{5}|[A-Z]{2}\d{6}|[A-Z]{4,6}\d{8,10}|[A-J][A-Z]{2}\d{5})(\.\d+)?$

Example Local Unique Identifier
X58356   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Nucleotide Sequence Database should match this regular expression:
^insdc:([A-Z]\d{5}|[A-Z]{2}\d{6}|[A-Z]{4,6}\d{8,10}|[A-J][A-Z]{2}\d{5})(\.\d+)?$

Example CURIE
insdc:X58356
Publications
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Has incoming URI collisions

The following resources share a URI format string with insdc:
nucleotide

When generating an extended prefix map, their respective CURIE prefixes and URI prefixes are merged into the record for insdc. If you believe that these are distinct semantic spaces and should not be merged, please open a new issue on the Bioregistry issue tracker for discussion.

Metaregistry Nucleotide Sequence Database

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext INSDC
Integbio Integbio logo integbio nbdc02567
Identifiers.org Identifiers.org logo miriam insdc
N2T Name-to-Thing logo n2t insdc
Prefix Commons Prefix Commons logo prefixcommons insdc
TogoID togoid Insdc
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE insdc:X58356 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Nucleotide Sequence Database insdc https://www.ncbi.nlm.nih.gov/nuccore/X58356
Bioregistry bioregistry https://bioregistry.io/insdc:X58356
Identifiers.org miriam https://identifiers.org/insdc:X58356
Name-to-Thing n2t https://n2t.net/insdc:X58356
National Center for Biotechnology Information Registry ncbi https://www.ncbi.nlm.nih.gov/nuccore/X58356
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
CURATOR_REVIEW INSDC through DDBJ http://getentry.ddbj.nig.ac.jp/getentry?database=ddbj&accession_number=X58356
bio2rdf Bio2RDF http://bio2rdf.org/insdc:X58356
ebi INSDC through European Nucleotide Archive (ENA) https://www.ebi.ac.uk/ena/data/view/X58356
ncbi INSDC through Nucleotide database at NCBI https://www.ncbi.nlm.nih.gov/nuccore/X58356