The HGNC (HUGO Gene Nomenclature Committee) provides an approved gene name and symbol (short-form abbreviation) for each known human gene. All approved symbols are stored in the HGNC database, and each symbol is unique. HGNC identifiers refer to records in the HGNC symbol database.
hgnc
Local identifiers in HUGO Gene Nomenclature Committee should match this
regular expression:
^\d{1,5}$
Compact URIs (CURIEs) constructed from HUGO Gene Nomenclature Committee should match
this regular expression:
^hgnc:\d{1,5}$
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 17 mappings to external registries with 7 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
AberOWL
|
aberowl |
HGNC
|
|
|
BARTOC
|
bartoc |
20688
|
|
| BioContext | biocontext |
HGNC
|
|
BioPortal
|
bioportal |
HGNC
|
|
Cellosaurus
|
cellosaurus |
HGNC
|
|
|
EDAM
|
edam |
2298
|
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.amcv1e
|
|
GO
|
go |
HGNC
|
|
HL7
|
hl7 |
2.16.840.1.113883.6.281
|
|
Identifiers.org
|
miriam |
hgnc
|
|
N2T
|
n2t |
hgnc
|
|
|
NCBI
|
ncbi |
HGNC
|
|
OLS
|
ols |
hgnc
|
|
|
Prefix Commons
|
prefixcommons |
hgnc
|
|
| TogoID | togoid |
Hgnc
|
|
|
UniProt
|
uniprot |
DB-0042
|
|
|
Wikidata
|
wikidata |
P354
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 16793 is used to demonstrate the providers
available for HUGO Gene Nomenclature Committee. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| HUGO Gene Nomenclature Committee | hgnc |
https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/16793 |
| Bioregistry | bioregistry |
https://bioregistry.io/hgnc:16793 |
| Identifiers.org | miriam |
https://identifiers.org/hgnc:16793 |
| Name-to-Thing | n2t |
https://n2t.net/hgnc:16793 |
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| Bio2RDF | bio2rdf |
http://bio2rdf.org/hgnc:16793 |
| The Gene Curation Coalition | gencc |
https://search.thegencc.org/genes/HGNC:16793 |
| INDRA Database | indra |
https://db.indra.bio/statements/from_agents?&format=html&agent0=16793@HGNC |