appears_in: [] contact: email: GLAndersen@lbl.gov name: Gary L Andersen orcid: 0000-0002-1618-9827 depends_on: [] deprecated: false description: A 16S rRNA gene database which provides chimera screening, standard alignment, and taxonomic classification using multiple published taxonomies. example: '100000' homepage: http://greengenes.lbl.gov/ keywords: - genetics - life science - rna mappings: biocontext: GREENGENES fairsharing: FAIRsharing.bpxgb6 integbio: nbdc01824 miriam: greengenes n2t: greengenes ncbi: Greengenes prefixcommons: greengenes re3data: r3d100010549 name: 16S rRNA gene database namespace_in_lui: false pattern: ^\d+$ preferred_prefix: greengenes prefix: greengenes providers: - code: bio2rdf description: Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers. homepage: https://bio2rdf.org name: Bio2RDF uri_format: http://bio2rdf.org/greengenes:$1 publications: - doi: 10.1128/aem.03006-05 pmc: PMC1489311 pubmed: '16820507' title: Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB year: 2006 - doi: 10.1128/AEM.03006-05 title: Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. synonyms: [] uri_format: http://greengenes.lbl.gov/cgi-bin/show_one_record_v2.pl?prokMSA_id=$1