{"prefix":"greengenes","name":"GreenGenes","description":"A 16S rRNA gene database which provides chimera screening, standard alignment, and taxonomic classification using multiple published taxonomies.","pattern":"^\\d+$","uri_format":"http://greengenes.lbl.gov/cgi-bin/show_one_record_v2.pl?prokMSA_id=$1","providers":[{"code":"bio2rdf","name":"Bio2RDF","description":"Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.","homepage":"https://bio2rdf.org","uri_format":"http://bio2rdf.org/greengenes:$1"}],"homepage":"http://greengenes.lbl.gov/","example":"100000","example_extras":[],"license":"CC","deprecated":true,"mappings":{"biocontext":"GREENGENES","integbio":"nbdc01824","miriam":"greengenes","n2t":"greengenes","ncbi":"Greengenes","prefixcommons":"greengenes","re3data":"r3d100010549"},"synonyms":[],"keywords":["genome/gene","rna","sequence","taxonomy"],"publications":[{"pubmed":"16820507","doi":"10.1128/aem.03006-05","pmc":"PMC1489311","title":"Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB","year":2006}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"greengenes"}