WikiPathways is a database of biological pathways maintained by and for the scientific community.

Prefix
wikipathways
License
CC0 1.0
Links
Homepage OWL @WikiPathways
Contact
Egon Willighagen   0000-0001-7542-0286   egonw
Pattern for Local Unique Identifiers

Local identifiers in WikiPathways should match this regular expression:
^WP\d{1,5}(\_r\d+)?$

Example Local Unique Identifier
WP732   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from WikiPathways should match this regular expression:
^wikipathways:WP\d{1,5}(\_r\d+)?$

Example CURIE
wikipathways:WP732
Publications
Contributors
Metaregistry WikiPathways

The metaregistry provides mappings between the Bioregistry and other registries. There are 10 mappings to external registries for wikipathways with 5 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL aberowl WIKIPATHWAYS
BioContext biocontext WIKIPATHWAYS
BioPortal Prefixes bioportal WIKIPATHWAYS
EDAM Ontology edam 3952
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.g7b4rj
Identifiers.org Identifiers.org logo miriam wikipathways
Name-to-Thing Name-to-Thing logo n2t wikipathways
Prefix Commons prefixcommons wikipathways
Registry of Research Data Repositories re3data r3d100013316
Wikidata Property Wikidata Property logo wikidata P2410
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE wikipathways:WP732 is used to demonstrate the provides available for wikipathways. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
WikiPathways wikipathways http://www.wikipathways.org/instance/WP732
Bioregistry bioregistry https://bioregistry.io/wikipathways:WP732
Identifiers.org miriam https://identifiers.org/wikipathways:WP732
Name-to-Thing n2t https://n2t.net/wikipathways:WP732
None scholia https://scholia.toolforge.org/wikipathways/WP732
None scholia https://scholia.toolforge.org/wikipathways/WP732
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
scholia Scholia https://scholia.toolforge.org/wikipathways/WP732