appears_in: []
contact:
  email: egon.willighagen@gmail.com
  github: egonw
  name: Egon Willighagen
  orcid: 0000-0001-7542-0286
contributor_extras:
- email: egon.willighagen@gmail.com
  github: egonw
  name: Egon Willighagen
  orcid: 0000-0001-7542-0286
depends_on: []
deprecated: false
description: WikiPathways is a database of biological pathways maintained by and for
  the scientific community.
example: WP732
example_extras: []
homepage: http://www.wikipathways.org/
keywords:
- biological regulation
- drug interaction
- epidemiology
- genetic interaction
- molecular interaction
- pathway
- pathway model
- protein interaction
- reaction data
- signaling
- virology
license: CC0-1.0
logo: https://www.wikipathways.org/assets/img/wikipathways-logo-horizontal.svg
mappings:
  biocontext: WIKIPATHWAYS
  edam: '3952'
  fairsharing: FAIRsharing.g7b4rj
  integbio: nbdc02116
  miriam: wikipathways
  n2t: wikipathways
  pathguide: '237'
  prefixcommons: wikipathways
  re3data: r3d100013316
  togoid: Wikipathways
  wikidata: P2410
mastodon: wikipathways@fosstodon.org
name: WikiPathways
namespace_in_lui: false
pattern: ^WP\d{1,5}(\_r\d+)?$
preferred_prefix: wikipathways
prefix: wikipathways
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/wikipathways:$1
- code: scholia
  description: 'Scholia is a service that creates visual scholarly profiles for topic,
    people, organizations, species, chemicals, etc using bibliographic and other information
    in Wikidata.

    '
  homepage: https://scholia.toolforge.org/
  name: Scholia
  uri_format: https://scholia.toolforge.org/wikipathways/$1
publications:
- doi: 10.1093/nar/gkad960
  pmc: PMC10767877
  pubmed: '37941138'
  title: 'WikiPathways 2024: next generation pathway database'
  year: 2024
- doi: 10.1093/nar/gkaa1024
  pmc: PMC7779061
  pubmed: '33211851'
  title: 'WikiPathways: connecting communities'
  year: 2021
- doi: 10.1093/nar/gkx1064
  pmc: PMC5753270
  pubmed: '29136241'
  title: 'WikiPathways: a multifaceted pathway database bridging metabolomics to other
    omics research'
  year: 2018
- doi: 10.1093/nar/gkv1024
  pmc: PMC4702772
  pubmed: '26481357'
  title: 'WikiPathways: capturing the full diversity of pathway knowledge'
  year: 2015
- doi: 10.1093/nar/gkr1074
  pmc: PMC3245032
  pubmed: '22096230'
  title: 'WikiPathways: building research communities on biological pathways'
  year: 2011
- doi: 10.1371/journal.pbio.0060184
  pmc: PMC2475545
  pubmed: '18651794'
  title: 'WikiPathways: pathway editing for the people'
  year: 2008
rdf_uri_format: http://identifiers.org/wikipathways/$1
synonyms: []
twitter: WikiPathways
uri_format: http://www.wikipathways.org/instance/$1
