Registry Transporter Classification Database

The database details a comprehensive IUBMB approved classification system for membrane transport proteins known as the Transporter Classification (TC) system. The TC system is analogous to the Enzyme Commission (EC) system for classification of enzymes, but incorporates phylogenetic information additionally.

Prefix
tcdb
Alternative Prefixes
TC
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Transporter Classification Database should match this regular expression:
^\d+(\.[A-Z])?(\.\d+)?(\.\d+)?(\.\d+)?$

Example Local Unique Identifier
5.A.1.1.1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Transporter Classification Database should match this regular expression:
^tcdb:\d+(\.[A-Z])?(\.\d+)?(\.\d+)?(\.\d+)?$

Example CURIE
tcdb:5.A.1.1.1
References
Metaregistry Transporter Classification Database

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for tcdb.

Registry Name Metaprefix External Prefix
BioContext biocontext TCDB
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.p3bzqb
Gene Ontology Registry go TC
Identifiers.org Identifiers.org logo miriam tcdb
Name-to-Thing Name-to-Thing logo n2t tcdb
Prefix Commons prefixcommons tcdb
UniProt Cross-ref database uniprot TCDB
Wikidata Property Wikidata Property logo wikidata P7260
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE tcdb: is used to demonstrate the provides available for tcdb. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Transporter Classification Database tcdb http://www.tcdb.org/search/result.php?tc=5.A.1.1.1
Bioregistry bioregistry https://bioregistry.io/tcdb:5.A.1.1.1
Identifiers.org miriam https://identifiers.org/tcdb:5.A.1.1.1
Name-to-Thing n2t https://n2t.net/tcdb:5.A.1.1.1