The database details a comprehensive IUBMB approved classification system for membrane transport proteins known as the Transporter Classification (TC) system. The TC system is analogous to the Enzyme Commission (EC) system for classification of enzymes, but incorporates phylogenetic information additionally.

Prefix

tcdb

Alternative Prefixes

TC

Keywords

protein protein family/group databases structure

Links

Homepage

Publications

2021 The Transporter Classification Database (TCDB): 2021 update

2015 The Transporter Classification Database (TCDB): recent advances

2013 The transporter classification database

2008 The Transporter Classification Database: recent advances

2006 TCDB: the Transporter Classification Database for membrane transport protein analyses and information

Pattern for Local Unique Identifiers

Local identifiers in Transporter Classification Database should match this regular expression:
^\d+(\.[A-Z])?(\.\d+)?(\.\d+)?(\.\d+)?$

Example Local Unique Identifier

5.A.1.1.1   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Transporter Classification Database should match this regular expression:
^tcdb:\d+(\.[A-Z])?(\.\d+)?(\.\d+)?(\.\d+)?$

Example CURIE

tcdb:5.A.1.1.1

Contact

Missing Contact

A summary of the relations in the Bioregistry schema can be found here.

In Collection (1)

Synapse.org external links

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 9 mappings to external registries with 6 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 5.A.1.1.1 is used to demonstrate the providers available for Transporter Classification Database. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.