Registry PRIDE Controlled Vocabulary

The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository that provides protein and peptide identifications together with supporting evidence. This collection references experiments and assays.

Homepage OWL
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Pattern for Local Unique Identifiers

Local identifiers in PRIDE Controlled Vocabulary should match this regular expression:

Example Local Unique Identifier
1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from PRIDE Controlled Vocabulary should match this regular expression:

Example CURIE

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for pride.

Registry Name Metaprefix External Prefix
Cellosaurus Registry cellosaurus PRIDE
FAIRSharing fairsharing FAIRsharing.e1byny miriam pride
Name-to-Thing n2t pride
Ontology Lookup Service ols pride
Prefix Commons prefixcommons PRIDE
UniProt Cross-ref database uniprot PRIDE

Providers are various services that resolve CURIEs to URLs. The example CURIE pride:1 is used to demonstrate the provides available for pride. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
PRIDE Controlled Vocabulary pride
Bioregistry bioregistry miriam
Name-to-Thing n2t