Registry Plant Transcription Factor Database

The Plant TF database (PlantTFDB) systematically identifies transcription factors for plant species. It includes annotation for identified TFs, including information on expression, regulation, interaction, conserved elements, phenotype information. It also provides curated descriptions and cross-references to other life science databases, as well as identifying evolutionary relationship among identified factors.

Prefix
planttfdb
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Plant Transcription Factor Database should match this regular expression:
^[A-Z][a-z]{2}_([A-Za-z]{3}[0-9]{6})|([A-Za-z0-9\._\-#]*)$

Example Local Unique Identifier
Ath_AT1G01030.1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Plant Transcription Factor Database should match this regular expression:
^planttfdb:[A-Z][a-z]{2}_([A-Za-z]{3}[0-9]{6})|([A-Za-z0-9\._\-#]*)$

Example CURIE
planttfdb:Ath_AT1G01030.1
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for planttfdb.

Registry Name Metaprefix External Prefix
Identifiers.org miriam planttfdb
Name-to-Thing n2t planttfdb
Prefix Commons prefixcommons PLANTTFDB
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE planttfdb:Ath_AT1G01030.1 is used to demonstrate the provides available for planttfdb. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Plant Transcription Factor Database planttfdb http://planttfdb.cbi.pku.edu.cn/tf.php?uid=Ath_AT1G01030.1
Bioregistry bioregistry https://bioregistry.io/planttfdb:Ath_AT1G01030.1
Identifiers.org miriam https://identifiers.org/planttfdb:Ath_AT1G01030.1
Name-to-Thing n2t https://n2t.net/planttfdb:Ath_AT1G01030.1