{"prefix":"planttfdb","name":"Plant Transcription Factor Database","description":"The Plant TF database (PlantTFDB) systematically identifies transcription factors for plant species. It includes annotation for identified TFs, including information on expression, regulation, interaction, conserved elements, phenotype information. It also provides curated descriptions and cross-references to other life science databases, as well as identifying evolutionary relationship among identified factors.","pattern":"^[A-Z][a-z]{2}_([A-Za-z]{3}[0-9]{6})|([A-Za-z0-9\\._\\-#]*)$","uri_format":"http://planttfdb.cbi.pku.edu.cn/tf.php?uid=$1","providers":[{"code":"bio2rdf","name":"Bio2RDF","description":"Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.","homepage":"https://bio2rdf.org","uri_format":"http://bio2rdf.org/planttfdb:$1"}],"homepage":"http://planttfdb.cbi.pku.edu.cn","contact":{"name":"Ge Gao","orcid":"0000-0001-6470-8815","email":"gaog@mail.cbi.pku.edu.cn","github":"gao-ge"},"example":"Ath_AT1G01030.1","example_extras":[],"deprecated":false,"mappings":{"biocontext":"PLANTTFDB","miriam":"planttfdb","n2t":"planttfdb","pathguide":"497","prefixcommons":"planttfdb","re3data":"r3d100011301"},"synonyms":[],"keywords":["dna","gene","protein","regulation","rna","small molecule"],"publications":[{"pubmed":"27924042","doi":"10.1093/nar/gkw982","pmc":"PMC5210657","title":"PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants","year":2016},{"pubmed":"25750178","doi":"10.1093/molbev/msv058","pmc":"PMC4476157","title":"An Arabidopsis Transcriptional Regulatory Map Reveals Distinct Functional and Evolutionary Features of Novel Transcription Factors","year":2015},{"pubmed":"24174544","doi":"10.1093/nar/gkt1016","pmc":"PMC3965000","title":"PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors","year":2013}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"planttfdb"}