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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF00004 - AAA) |
| ATPase family associated with various cellular activities (AAA) |
| (Pfam reference: accession no. PF00004) |
| (Interpro reference: accession no. IPR003959) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
245 sequences @ 410 aa (ave. pairwise identity: 0.27) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 139.73) |
| nucleotides (available for above) |
241 sequences @ 1230 bp (ave. pairwise identity: 0.39) |
New Hampshire format (total tree length: 109.09) |
|
amino acids, restricted set (corresp. to available nt seqs) |
241 sequences @ 410 aa (ave. pairwise identity: 0.27) |
New Hampshire format (total tree length: 138.12) |