Registry Kyoto Encyclopedia of Genes and Genomes Deprecated

Kyoto Encyclopedia of Genes and Genomes (KEGG) is a database resource for understanding high-level functions and utilities of the biological system, such as the cell, the organism and the ecosystem, from molecular-level information, especially large-scale molecular datasets generated by genome sequencing and other high-throughput experimental technologies.

Comment

KEGG prefix has been split into several others

Prefix
kegg
Alternative Prefixes
KEGG
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Kyoto Encyclopedia of Genes and Genomes should match this regular expression:
^([CHDEGTMKR]\d+)|(\w+:[\w\d\.-]*)|([a-z]{3,5})|(\w{2,4}\d{5})$

Example Local Unique Identifier
hsa00190   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Kyoto Encyclopedia of Genes and Genomes should match this regular expression:
^kegg:([CHDEGTMKR]\d+)|(\w+:[\w\d\.-]*)|([a-z]{3,5})|(\w{2,4}\d{5})$

Example CURIE
kegg:hsa00190
Publications
2016 KEGG: new perspectives on genomes, pathways, diseases and drugs
Metaregistry Kyoto Encyclopedia of Genes and Genomes

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 5 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext KEGG
Biolink Biolink Model Registry logo biolink KEGG
CHEMINF cheminf 000409
GO Gene Ontology Registry logo go KEGG
Integbio Integbio logo integbio nbdc00530
Identifiers.org Identifiers.org logo miriam kegg
N2T Name-to-Thing logo n2t kegg
Pathguide Pathguide logo pathguide 16
UniProt UniProt Cross-ref database logo uniprot DB-0053
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE kegg:hsa00190 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Kyoto Encyclopedia of Genes and Genomes kegg http://www.kegg.jp/entry/hsa00190
Bioregistry bioregistry https://bioregistry.io/kegg:hsa00190
Identifiers.org miriam https://identifiers.org/kegg:hsa00190
Name-to-Thing n2t https://n2t.net/kegg:hsa00190