KEGG Modules are manually defined functional units used in the annotation and biological interpretation of sequenced genomes. Each module corresponds to a set of 'KEGG Orthology' (MIR:00000116) entries. KEGG Modules can represent pathway, structural, functional or signature modules.
kegg.module
Local identifiers in KEGG Module should match this
regular expression:
^([a-z]{3,5}_)?M\d{5}$
Compact URIs (CURIEs) constructed from KEGG Module should match
this regular expression:
^kegg\.module:([a-z]{3,5}_)?M\d{5}$
The metaregistry provides mappings between the Bioregistry and other registries. There are
3 mappings to external registries for kegg.module
with
1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
KEGG.MODULE
|
|
Identifiers.org
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miriam |
kegg.module
|
|
N2T
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n2t |
kegg.module
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
kegg.module:M00002
is used to demonstrate the provides available for
kegg.module
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
KEGG Module | kegg.module |
http://www.kegg.jp/entry/M00002 |
Bioregistry | bioregistry |
https://bioregistry.io/kegg.module:M00002 |
Identifiers.org | miriam |
https://identifiers.org/kegg.module:M00002 |
Name-to-Thing | n2t |
https://n2t.net/kegg.module:M00002 |