Registry Human Protein Atlas tissue profile information

The Human Protein Atlas (HPA) is a publicly available database with high-resolution images showing the spatial distribution of proteins in different normal and cancer human cell lines. Primary access to this collection is through Ensembl Gene identifiers.

Prefix
hpa
Keywords
biomedical science protein proteomics structure systems biology transcriptomics
Links
Homepage @ProteinAtlas
Contact
Mathias Uhlen   0000-0002-4858-8056
Pattern for Local Unique Identifiers

Local identifiers in Human Protein Atlas tissue profile information should match this regular expression:
^ENSG\d{11}$

Example Local Unique Identifier
ENSG00000026508   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Human Protein Atlas tissue profile information should match this regular expression:
^hpa:ENSG\d{11}$

Example CURIE
hpa:ENSG00000026508
Publications
Metaregistry Human Protein Atlas tissue profile information

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext HPA
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.j0t0pe
GO Gene Ontology Registry logo go HPA
Identifiers.org Identifiers.org logo miriam hpa
N2T Name-to-Thing logo n2t hpa
Prefix Commons Prefix Commons logo prefixcommons hpa
re3data Registry of Research Data Repositories logo re3data r3d100010931
UniProt UniProt Cross-ref database logo uniprot DB-0046
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE hpa:ENSG00000026508 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Human Protein Atlas tissue profile information hpa http://www.proteinatlas.org/ENSG00000026508
Bioregistry bioregistry https://bioregistry.io/hpa:ENSG00000026508
Identifiers.org miriam https://identifiers.org/hpa:ENSG00000026508
Name-to-Thing n2t https://n2t.net/hpa:ENSG00000026508
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/hpa:ENSG00000026508