{"prefix":"hpa","name":"Human Protein Atlas tissue profile information","description":"The Human Protein Atlas (HPA) is a publicly available database with high-resolution images showing the spatial distribution of proteins in different normal and cancer human cell lines. Primary access to this collection is through Ensembl Gene identifiers.","pattern":"^ENSG\\d{11}$","uri_format":"http://www.proteinatlas.org/$1","providers":[{"code":"bio2rdf","name":"Bio2RDF","description":"Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.","homepage":"https://bio2rdf.org","uri_format":"http://bio2rdf.org/hpa:$1"}],"homepage":"http://www.proteinatlas.org/","example":"ENSG00000026508","example_extras":[],"deprecated":false,"mappings":{"biocontext":"HPA","go":"HPA","miriam":"hpa","n2t":"hpa","prefixcommons":"hpa","re3data":"r3d100010931","uniprot":"DB-0046"},"synonyms":[],"keywords":["organism-specific databases","protein","structure"],"publications":[{"pubmed":"28818916","doi":"10.1126/science.aan2507","title":"A pathology atlas of the human cancer transcriptome","year":2017},{"pubmed":"28495876","doi":"10.1126/science.aal3321","title":"A subcellular map of the human proteome","year":2017},{"pubmed":"27044256","doi":"10.15252/msb.20155865","pmc":"PMC4848759","title":"Transcriptomics resources of human tissues and organs","year":2016},{"pubmed":"25613900","doi":"10.1126/science.1260419","title":"Proteomics. Tissue-based map of the human proteome","year":2015},{"pubmed":"21139605","doi":"10.1038/nbt1210-1248","title":"Towards a knowledge-based Human Protein Atlas","year":2010},{"pubmed":"18853439","doi":"10.1002/path.2440","title":"The Human Protein Atlas--a tool for pathology","year":2008},{"pubmed":"18669619","doi":"10.1074/mcp.r800013-mcp200","title":"A genecentric Human Protein Atlas for expression profiles based on antibodies","year":2008},{"pubmed":"16127175","doi":"10.1074/mcp.m500279-mcp200","title":"A human protein atlas for normal and cancer tissues based on antibody proteomics","year":2005}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"hpa"}