Registry Global Proteome Machine Database
The Global Proteome Machine Database was constructed to utilize the information obtained by GPM servers to aid in the difficult process of validating peptide MS/MS spectra as well as protein coverage patterns.
- Prefix
gpmdb- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in Global Proteome Machine Database should match this regular expression:
^GPM\d+$ - Example Local Unique Identifier
- GPM32310002988 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Global Proteome Machine Database should match this regular expression:
^gpmdb:GPM\d+$ - Example CURIE
- gpmdb:GPM32310002988
Metaregistry Global Proteome Machine Database
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for gpmdb.
| Registry Name | Metaprefix | External Prefix |
|---|---|---|
FAIRSharing
|
fairsharing |
FAIRsharing.fhcmwq
|
Identifiers.org
|
miriam |
gpmdb
|
Name-to-Thing
|
n2t |
gpmdb
|
| Prefix Commons | prefixcommons |
GPMDB
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
gpmdb:GPM32310002988 is used to demonstrate the provides available for
gpmdb. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Extra Providers
Additional providers curated in the Bioregistry are listed here.
| Code | Name | URL |
|---|---|---|
| omicsdi | GPMDB through OmicsDI | https://www.omicsdi.org/dataset/gpmdb/GPM32310002988 |