Bioregistry - EchoBASE post-genomic database for Escherichia coli

Registry EchoBASE post-genomic database for Escherichia coli

EchoBASE is a database designed to contain and manipulate information from post-genomic experiments using the model bacterium Escherichia coli K-12. The database is built on an enhanced annotation of the updated genome sequence of strain MG1655 and the association of experimental data with the E.coli genes and their products.

Prefix: echobase
Links: Homepage
Contact: Missing Contact
Pattern for Local Unique Identifiers: Local identifiers in EchoBASE post-genomic database for Escherichia coli should match this regular expression:
^EB\d+$
Example Local Unique Identifier: EB0170 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from EchoBASE post-genomic database for Escherichia coli should match this regular expression:
^echobase:EB\d+$
Example CURIE: echobase:EB0170

Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for echobase.

Registry Name	Metaprefix	External Prefix
Gene Ontology Registry	`go`	`EchoBASE`
Identifiers.org	`miriam`	`echobase`
Name-to-Thing	`n2t`	`echobase`
Prefix Commons	`prefixcommons`	`ECHOBASE`
UniProt Cross-ref database	`uniprot`	`EchoBASE`

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE echobase:EB0170 is used to demonstrate the provides available for echobase. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
EchoBASE post-genomic database for Escherichia coli	`echobase`	http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0170
Bioregistry	`bioregistry`	https://bioregistry.io/echobase:EB0170
Identifiers.org	`miriam`	https://identifiers.org/echobase:EB0170
Name-to-Thing	`n2t`	https://n2t.net/echobase:EB0170