EchoBASE is a database designed to contain and manipulate information from post-genomic experiments using the model bacterium Escherichia coli K-12. The database is built on an enhanced annotation of the updated genome sequence of strain MG1655 and the association of experimental data with the E.coli genes and their products.
Local identifiers in EchoBASE post-genomic database for Escherichia coli should match this
Compact URIs (CURIEs) constructed from EchoBASE post-genomic database for Escherichia coli should match
this regular expression:
The metaregistry provides mappings between the Bioregistry and other registries. There are
7 mappings to external registries for
3 unique external prefixes.
|Registry Name||Registry Metaprefix||External Prefix||Curate|
|Gene Ontology Registry||
|Registry of Research Data Repositories||
|UniProt Cross-ref database||
Providers are various services that resolve CURIEs to URLs. The example CURIE
is used to demonstrate the provides available for
echobase. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
|EchoBASE post-genomic database for Escherichia coli||