{"prefix":"echobase","name":"EchoBASE","description":"EchoBASE is a database designed to contain and manipulate information from post-genomic experiments using the model bacterium Escherichia coli K-12. The database is built on an enhanced annotation of the updated genome sequence of strain MG1655 and the association of experimental data with the E.coli genes and their products.","pattern":"^EB\\d+$","uri_format":"http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=$1","providers":[{"code":"bio2rdf","name":"Bio2RDF","description":"Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.","homepage":"https://bio2rdf.org","uri_format":"http://bio2rdf.org/echobase:$1"}],"homepage":"http://www.york.ac.uk/","contact":{"name":"Gavin H. Thomas","orcid":"0000-0002-9763-1313","email":"gavin.thomas@york.ac.uk","github":"ghthomas"},"example":"EB0170","example_extras":[],"deprecated":false,"mappings":{"biocontext":"ECHOBASE","go":"EchoBASE","miriam":"echobase","n2t":"echobase","prefixcommons":"echobase","re3data":"r3d100011646","uniprot":"DB-0020"},"synonyms":[],"keywords":["gene","gene expression","organism-specific databases"],"publications":[{"pubmed":"15608209","doi":"10.1093/nar/gki028","pmc":"PMC539982","title":"EchoBASE: an integrated post-genomic database for Escherichia coli","year":2005}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"echobase"}