appears_in: []
depends_on: []
deprecated: false
description: The dbSNP database is a repository for both single base nucleotide subsitutions
  and short deletion and insertion polymorphisms.
example: rs121909098
homepage: https://www.ncbi.nlm.nih.gov/snp/
keywords:
- genome
- life science
mappings:
  biocontext: dbSNP
  cellosaurus: dbSNP
  edam: '1106'
  fairsharing: FAIRsharing.edxb58
  go: dbSNP
  hl7: 2.16.840.1.113883.6.284
  integbio: nbdc00206
  miriam: dbsnp
  n2t: dbsnp
  ncbi: dbSNP
  prefixcommons: dbsnp
  re3data: r3d100010652
  togoid: Dbsnp
  uniprot: DB-0013
  wikidata: P6861
name: dbSNP Reference SNP number
namespace_in_lui: false
pattern: ^rs\d+$
preferred_prefix: dbsnp
prefix: dbsnp
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/dbsnp:$1
- code: sib
  description: SNP2TFBS
  homepage: https://ccg.epfl.ch/snp2tfbs/
  name: SNP2TFBS
  uri_format: https://ccg.epfl.ch/cgi-bin/snp2tfbs/snpviewer_form_parser.cgi?snpid=$1
publications:
- doi: 10.1093/nar/gkaa892
  pubmed: '33095870'
- doi: 10.1093/nar/gkl1031
  pmc: PMC1781113
  pubmed: '17170002'
  title: Database resources of the National Center for Biotechnology Information
  year: 2006
- doi: 10.1093/nar/29.1.308
  pmc: PMC29783
  pubmed: '11125122'
  title: 'dbSNP: the NCBI database of genetic variation'
  year: 2001
repository: https://github.com/ncbi/dbsnp/tree/master/tutorials
synonyms: []
uri_format: https://www.ncbi.nlm.nih.gov/snp/$1
