GeneDB is a genome database for prokaryotic and eukaryotic organisms and provides a portal through which data generated by the "Pathogen Genomics" group at the Wellcome Trust Sanger Institute and other collaborating sequencing centres can be accessed.

Prefix

genedb

Keywords

genome life science sequence

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in GeneDB should match this regular expression:
^[\w\d\.-]*$

Example Local Unique Identifier

LinJ.20.0070   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from GeneDB should match this regular expression:
^genedb:[\w\d\.-]*$

Example CURIE

genedb:LinJ.20.0070

Publications

2004 GeneDB: a resource for prokaryotic and eukaryotic organisms

The metaregistry provides mappings between the Bioregistry and other registries. There are 11 mappings to external registries for this resource with 6 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier LinJ.20.0070 is used to demonstrate the providers available for GeneDB. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.