The Enzyme Classification contains the recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology on the nomenclature and classification of enzyme-catalysed reactions.
- Prefix
eccode- Alternative Prefixes
- ECCODE EC_CODE ec-code EC-CODE EC number intenz EC
- Keywords
- biochemistry centrally registered identifier classification enzyme enzyme commission number enzymology
- License
- CC-BY-4.0
- Links
- Homepage
- Contact
- Kristian Axelsen 0000-0003-3889-2879 kaxelsen
- Pattern for Local Unique Identifiers
-
Local identifiers in Enzyme Commission Code should match this regular expression:
^\d{1,2}(((\.\d{1,3}){1,3})|(\.\d+){2}\.[nB]\d{1,3})?$ - Example Local Unique Identifiers
-
1.1.1.1
Resolve
2 Resolve
2.3 Resolve
2.3.1 Resolve
2.3.1.n12 Resolve
3.1.26.n2 Resolve
3.4.24.B15 Resolve - Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Enzyme Commission Code should match this regular expression:
^eccode:\d{1,2}(((\.\d{1,3}){1,3})|(\.\d+){2}\.[nB]\d{1,3})?$ - Example CURIEs
-
eccode:1.1.1.1
eccode:2
eccode:2.3
eccode:2.3.1
eccode:2.3.1.n12
eccode:3.1.26.n2
eccode:3.4.24.B15 - Publications
- 2000 The ENZYME database in 2000
- References
- GitHub Issue https://github.com/biopragmatics/bioregistry/issues/681
Ontology
A summary of the relations in the Bioregistry schema can be found here.
- Provided By
- brenda kegg.enzyme sabiork.ec
Metaregistry Enzyme Commission Code
The metaregistry provides mappings between the Bioregistry and other registries. There are 14 mappings to external registries for this resource with 11 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
BARTOC
|
bartoc |
671
|
|
| BioContext | biocontext |
EC-CODE
|
|
EDAM
|
edam |
1011
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.rfLD2u
|
|
GO
|
go |
EC
|
|
Integbio
|
integbio |
nbdc00508
|
|
Identifiers.org
|
miriam |
ec-code
|
|
N2T
|
n2t |
ec-code
|
|
Pathguide
|
pathguide |
106
|
|
Prefix Commons
|
prefixcommons |
intenz
|
|
re3data
|
re3data |
r3d100010803
|
|
| TogoID | togoid |
Ec
|
|
UniProt
|
uniprot |
DB-0024
|
|
Wikidata
|
wikidata |
P591
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 1.1.1.1 is used to demonstrate the providers
available for Enzyme Commission Code. A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| Enzyme Commission Code | eccode |
https://www.ebi.ac.uk/intenz/query?cmd=SearchEC&ec=1.1.1.1 |
| Bioregistry | bioregistry |
https://bioregistry.io/eccode:1.1.1.1 |
| Identifiers.org | miriam |
https://identifiers.org/ec-code:1.1.1.1 |
| Name-to-Thing | n2t |
https://n2t.net/ec-code:1.1.1.1 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/intenz:1.1.1.1 |
expasy |
Enzyme nomenclature database, ExPASy (Expert Protein Analysis System) | https://enzyme.expasy.org/EC/1.1.1.1 |
expenz |
ExploreEnz at Trinity College | http://www.enzyme-database.org/query.php?ec=1.1.1.1 |