The database VBASE2 provides germ-line sequences of human and mouse immunoglobulin variable (V) genes.

Prefix
vbase2
Keywords
gene genetic variation genome/gene protein sequence
Links
Homepage
Publications
2005 VBASE2, an integrative V gene database
Identifier Standards
Pattern for Local Unique Identifiers

Local identifiers in Vbase2 should match this regular expression:
^\w+$

Example Local Unique Identifier
humIGHV025   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Vbase2 should match this regular expression:
^vbase2:\w+$

Example CURIE
vbase2:humIGHV025
Contacts
Contact
Missing Contact
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 6 mappings to external registries with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext VBASE2
Integbio Integbio logo integbio nbdc01897
Identifiers.org Identifiers.org logo miriam vbase2
N2T Name-to-Thing logo n2t vbase2
NCBI National Center for Biotechnology Information Registry logo ncbi VBASE2
Prefix Commons Prefix Commons logo prefixcommons vbase2
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier humIGHV025 is used to demonstrate the providers available for Vbase2. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
Vbase2 vbase2 http://www.vbase2.org/vgene.php?id=humIGHV025
Bioregistry bioregistry https://bioregistry.io/vbase2:humIGHV025
Identifiers.org miriam https://identifiers.org/vbase2:humIGHV025
Name-to-Thing n2t https://n2t.net/vbase2:humIGHV025
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Provider Name Provider Code URL
Bio2RDF bio2rdf http://bio2rdf.org/vbase2:humIGHV025