Logo for Signaling Network Open Resource

SIGNOR, the SIGnaling Network Open Resource, organizes and stores in a structured format signaling information published in the scientific literature.

Prefix
signor
Alternative Prefixes
SIGNOR
Keywords
enzyme and pathway databases interactions ontology protein sbml
License
CC-BY-NC-4.0
Links
Homepage OBO OWL OBO JSON
Publications
2022 SIGNOR 3.0, the SIGnaling network open resource 3.0: 2022 update
https://bioregistry.io/pubmed:31665520
2015 SIGNOR: a database of causal relationships between biological entities
Identifier Standards
Pattern for Local Unique Identifiers

Local identifiers in Signaling Network Open Resource should match this regular expression:
^SIGNOR\-[A-Z]+\d+$

Example Local Unique Identifier
SIGNOR-C41   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Signaling Network Open Resource should match this regular expression:
^signor:SIGNOR\-[A-Z]+\d+$

Example CURIE
signor:SIGNOR-C41
Contacts
Contact
Missing Contact
Ontology

A summary of the relations in the Bioregistry schema can be found here.

In Collection (1)
Synapse.org external links
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 4 mappings to external registries with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
Identifiers.org Identifiers.org logo miriam signor
Pathguide Pathguide logo pathguide 599
Prefix Commons Prefix Commons logo prefixcommons signor
UniProt UniProt Cross-ref database logo uniprot DB-0206
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier SIGNOR-C41 is used to demonstrate the providers available for Signaling Network Open Resource. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
Signaling Network Open Resource signor https://signor.uniroma2.it/relation_result.php?id=SIGNOR-C41
Bioregistry bioregistry https://bioregistry.io/signor:SIGNOR-C41
Identifiers.org miriam https://identifiers.org/signor:SIGNOR-C41
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Provider Name Provider Code URL
Bio2RDF bio2rdf http://bio2rdf.org/signor:SIGNOR-C41