ProtClustDB is a collection of related protein sequences (clusters) consisting of Reference Sequence proteins encoded by complete genomes. This database contains both curated and non-curated clusters.

Prefix
protclustdb
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in ProtClustDB should match this regular expression:
^\w+$

Example Local Unique Identifier
O80725   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from ProtClustDB should match this regular expression:
^protclustdb:\w+$

Example CURIE
protclustdb:O80725
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for protclustdb.

Registry Name Metaprefix External Prefix
Identifiers.org miriam protclustdb
Name-to-Thing n2t protclustdb
Prefix Commons prefixcommons PROTCLUSTDB
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE protclustdb:O80725 is used to demonstrate the provides available for protclustdb. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
ProtClustDB protclustdb https://www.ncbi.nlm.nih.gov/sites/entrez?Db=proteinclusters&Cmd=DetailsSearch&Term=O80725
Bioregistry bioregistry https://bioregistry.io/protclustdb:O80725
Identifiers.org miriam https://identifiers.org/protclustdb:O80725
Name-to-Thing n2t https://n2t.net/protclustdb:O80725