ProtClustDB is a collection of related protein sequences (clusters) consisting of Reference Sequence proteins encoded by complete genomes. This database contains both curated and non-curated clusters.
protclustdb
Local identifiers in ProtClustDB should match this
regular expression:
^\w+$
Compact URIs (CURIEs) constructed from ProtClustDB should match
this regular expression:
^protclustdb:\w+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PROTCLUSTDB
|
|
FAIRSharing | fairsharing |
FAIRsharing.da493y
|
|
Identifiers.org | miriam |
protclustdb
|
|
N2T | n2t |
protclustdb
|
|
Prefix Commons | prefixcommons |
protclustdb
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
protclustdb:O80725
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/protclustdb:O80725 |