ProtClustDB is a collection of related protein sequences (clusters) consisting of Reference Sequence proteins encoded by complete genomes. This database contains both curated and non-curated clusters.

Prefix

protclustdb

Keywords

genetics genomics life science protein structure

Links

Homepage

Contact

William Klimke

Pattern for Local Unique Identifiers

Local identifiers in ProtClustDB should match this regular expression:
^\w+$

Example Local Unique Identifier

O80725   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from ProtClustDB should match this regular expression:
^protclustdb:\w+$

Example CURIE

protclustdb:O80725

Publications

2008 The National Center for Biotechnology Information's Protein Clusters Database

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier O80725 is used to demonstrate the providers available for ProtClustDB. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.