Pocketome is an encyclopedia of conformational ensembles of all druggable binding sites that can be identified experimentally from co-crystal structures in the Protein Data Bank. Each Pocketome entry corresponds to a small molecule binding site in a protein which has been co-crystallized in complex with at least one drug-like small molecule, and is represented in at least two PDB entries.
pocketome
Local identifiers in Pocketome should match this
regular expression:
^[A-Za-z_0-9]+$
Compact URIs (CURIEs) constructed from Pocketome should match
this regular expression:
^pocketome:[A-Za-z_0-9]+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for pocketome
with
2 unique external prefixes.
Registry Name | Metaprefix | External Prefix |
---|---|---|
BioContext | biocontext |
POCKETOME
|
FAIRSharing
|
fairsharing |
FAIRsharing.tc6df8
|
Identifiers.org
![]() |
miriam |
pocketome
|
Name-to-Thing
![]() |
n2t |
pocketome
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
pocketome:1433C_TOBAC_1_252
is used to demonstrate the provides available for
pocketome
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.