Pocketome is an encyclopedia of conformational ensembles of all druggable binding sites that can be identified experimentally from co-crystal structures in the Protein Data Bank. Each Pocketome entry corresponds to a small molecule binding site in a protein which has been co-crystallized in complex with at least one drug-like small molecule, and is represented in at least two PDB entries.

Prefix

pocketome

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in Pocketome should match this regular expression:
^[A-Za-z_0-9]+$

Example Local Unique Identifier

1433C_TOBAC_1_252   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Pocketome should match this regular expression:
^pocketome:[A-Za-z_0-9]+$

Example CURIE

pocketome:1433C_TOBAC_1_252

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for pocketome.

Providers are various services that resolve CURIEs to URLs. The example CURIE pocketome:1433C_TOBAC_1_252 is used to demonstrate the provides available for pocketome. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.