{"prefix":"pocketome","name":"Pocketome","description":"Pocketome is an encyclopedia of conformational ensembles of all druggable binding sites that can be identified experimentally from co-crystal structures in the Protein Data Bank. Each Pocketome entry corresponds to a small molecule binding site in a protein which has been co-crystallized in complex with at least one drug-like small molecule, and is represented in at least two PDB entries.","pattern":"^[A-Za-z_0-9]+$","uri_format":"http://www.pocketome.org/files/$1.html","providers":[],"homepage":"http://www.pocketome.org/sfSearch.cgi?act=browseall","contact":{"name":"Ruben Abagyan","orcid":"0000-0001-9309-2976","email":"ikufareva@ucsd.edu"},"example":"1433C_TOBAC_1_252","example_extras":[],"deprecated":false,"mappings":{"biocontext":"POCKETOME","miriam":"pocketome","n2t":"pocketome","pathguide":"537"},"synonyms":[],"keywords":[],"publications":[{"pubmed":"22080553","doi":"10.1093/nar/gkr825","pmc":"PMC3245087","title":"Pocketome: an encyclopedia of small-molecule binding sites in 4D","year":2011},{"pubmed":"19727619","doi":"10.1007/978-1-60761-274-2_11","pmc":"PMC2975493","title":"The flexible pocketome engine for structural chemogenomics","year":2009}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"pocketome"}