Registry Pharmacogene Variation Consortium Provider

The Pharmacogene Variation (PharmVar) Consortium is the new home for PGx gene nomenclature serving as a centralized ‘Next-Generation’ Pharmacogene Variation data repository. The major focus of PharmVar is to catalogue allelic variation of genes impacting drug metabolism, disposition and response and provide a unifying designation system (nomenclature) for the global pharmacogenetic/genomic community. Efforts are synchronized between PharmVar, the Pharmacogenomic KnowledgeBase, and the Clinical Pharmacogenetic Implementation Consortium.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the hgnc.symbol prefix. For all use cases, you should use hgnc.symbol instead of pharmvar.

Prefix
pharmvar
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
CYP2A6   Resolve
Pattern for CURIES
Could not construct CURIE pattern
Example CURIE
pharmvar:CYP2A6
Publications
https://bioregistry.io/pubmed:29134625
Reviewer
Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt
Ontology
Provides
hgnc.symbol
Metaregistry Pharmacogene Variation Consortium

The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for pharmvar with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
Prefix Commons prefixcommons pharmvar
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE pharmvar:CYP2A6 is used to demonstrate the provides available for pharmvar. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Pharmacogene Variation Consortium pharmvar https://www.pharmvar.org/gene/CYP2A6
Bioregistry bioregistry https://bioregistry.io/pharmvar:CYP2A6