The PharmGKB database is a central repository for genetic, genomic, molecular and cellular phenotype data and clinical information about people who have participated in pharmacogenomics research studies. The data includes, but is not limited to, clinical and basic pharmacokinetic and pharmacogenomic research in the cardiovascular, pulmonary, cancer, pathways, metabolic and transporter domains.

Prefix

pharmgkb.gene

Keywords

gene ontology pharmacogenomics

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in PharmGKB Gene should match this regular expression:
^PA\w+$

Example Local Unique Identifier

PA131   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from PharmGKB Gene should match this regular expression:
^pharmgkb\.gene:PA\w+$

Example CURIE

pharmgkb.gene:PA131

Publications

• 2011 From pharmacogenomic knowledge acquisition to clinical applications: the PharmGKB as a clinical pharmacogenomic biomarker resource.
• 2005 PharmGKB: the pharmacogenetics and pharmacogenomics knowledge base.

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for pharmgkb.gene with 4 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE pharmgkb.gene:PA131 is used to demonstrate the provides available for pharmgkb.gene. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Additional providers curated in the Bioregistry are listed here.