A database providing information on the structure of assembled genomes, assembly names and other meta-data, statistical reports, and links to genomic sequence data.

Prefix
ncbi.assembly
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Assembly should match this regular expression:
^[a-zA-Z0-9_\.]+$

Example Local Unique Identifier
GCF_000005845.2   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Assembly should match this regular expression:
^ncbi\.assembly:[a-zA-Z0-9_\.]+$

Example CURIE
ncbi.assembly:GCF_000005845.2
Ontology
Canonical For (1)
insdc.gca
Metaregistry Assembly

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for ncbi.assembly with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext NCBIAssembly
Identifiers.org Identifiers.org logo miriam assembly
Registry of Research Data Repositories re3data r3d100012688
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ncbi.assembly:GCF_000005845.2 is used to demonstrate the provides available for ncbi.assembly. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Assembly ncbi.assembly https://www.ncbi.nlm.nih.gov/assembly/GCF_000005845.2
Bioregistry bioregistry https://bioregistry.io/ncbi.assembly:GCF_000005845.2
Identifiers.org miriam https://identifiers.org/assembly:GCF_000005845.2