The genome assembly database contains detailed information about genome assemblies for eukaryota, bacteria and archaea. The scope of the genome collections database does not extend to viruses, viroids and bacteriophage.

Prefix

insdc.gca

Links

Homepage

Pattern for Local Unique Identifiers

Local identifiers in Genome assembly database - INSDC accessions should match this regular expression:
^GCA_[0-9]{9}(\.[0-9]+)?$

Example Local Unique Identifier

GCA_000155495.1   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Genome assembly database - INSDC accessions should match this regular expression:
^insdc\.gca:GCA_[0-9]{9}(\.[0-9]+)?$

Example CURIE

insdc.gca:GCA_000155495.1

Contact

Missing Contact

Identifier Space Owner

National Center for Biotechnology Information

A summary of the relations in the Bioregistry schema can be found here.

Has URI collision with (bioregistry.schema:0000016 )

This resource shares one or more URI format strings with ncbi.assembly .

Therefore, when generating an extended prefix map, insdc.gca, its CURIE prefix synonyms, and its URI prefix synonyms are merged into the record for ncbi.assembly . If you believe that these are two distinct semantic spaces and should not be merged, please open a new issue on the Bioregistry issue tracker for discussion.

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier GCA_000155495.1 is used to demonstrate the providers available for Genome assembly database - INSDC accessions. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.