The genome assembly database contains detailed information about genome assemblies for eukaryota, bacteria and archaea. The scope of the genome collections database does not extend to viruses, viroids and bacteriophage.

Prefix
insdc.gca
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Genome assembly database should match this regular expression:
^GC[AF]_[0-9]{9}\.[0-9]+$

Example Local Unique Identifier
GCA_000155495.1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Genome assembly database should match this regular expression:
^insdc\.gca:GC[AF]_[0-9]{9}\.[0-9]+$

Example CURIE
insdc.gca:GCA_000155495.1
Ontology
Has Canonical
ncbi.assembly
Metaregistry Genome assembly database

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for insdc.gca with 1 unique external prefixes.

Registry Name Metaprefix External Prefix
BioContext biocontext INSDC.GCA
Identifiers.org Identifiers.org logo miriam insdc.gca
Name-to-Thing Name-to-Thing logo n2t insdc.gca
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE insdc.gca:GCA_000155495.1 is used to demonstrate the provides available for insdc.gca. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Genome assembly database insdc.gca https://www.ebi.ac.uk/ena/data/view/GCA_000155495.1
Bioregistry bioregistry https://bioregistry.io/insdc.gca:GCA_000155495.1
Identifiers.org miriam https://identifiers.org/insdc.gca:GCA_000155495.1
Name-to-Thing n2t https://n2t.net/insdc.gca:GCA_000155495.1
National Center for Biotechnology Information Registry ncbi https://www.ncbi.nlm.nih.gov/assembly/GCA_000155495.1
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
ncbi Genome assembly database NCBI https://www.ncbi.nlm.nih.gov/assembly/GCA_000155495.1