The genome assembly database contains detailed information about genome assemblies for eukaryota, bacteria and archaea. The scope of the genome collections database RefSeq accessions does not extend to viroids and bacteriophage.

Prefix

insdc.gcf

Alternative Prefixes

insdc.gcf

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in Genome assembly database - RefSeq accessions should match this regular expression:
^GCF_[0-9]{9}(\.[0-9]+)?$

Example Local Unique Identifier

GCF_000001405   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Genome assembly database - RefSeq accessions should match this regular expression:
^insdc\.gcf:GCF_[0-9]{9}(\.[0-9]+)?$

Example CURIE

insdc.gcf:GCF_000001405

A summary of the relations in the Bioregistry schema can be found here.

Has URI collision with (bioregistry.schema:0000016 )

This resource shares one or more URI format strings with ncbi.assembly .

Therefore, when generating an extended prefix map, insdc.gcf, its CURIE prefix synonyms, and its URI prefix synonyms are merged into the record for ncbi.assembly . If you believe that these are two distinct semantic spaces and should not be merged, please open a new issue on the Bioregistry issue tracker for discussion.

The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE insdc.gcf:GCF_000001405 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.