Registry Microbial Protein Interaction Database

The microbial protein interaction database (MPIDB) provides physical microbial interaction data. The interactions are manually curated from the literature or imported from other databases, and are linked to supporting experimental evidence, as well as evidences based on interaction conservation, protein complex membership, and 3D domain contacts.

Alternative Prefixes
interaction life science protein small molecule
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Microbial Protein Interaction Database should match this regular expression:

Example Local Unique Identifier
172   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Microbial Protein Interaction Database should match this regular expression:

Example CURIE
2008 MPIDB: the microbial protein interaction database.
Metaregistry Microbial Protein Interaction Database

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for mpid with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext MPID
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.eyjkws logo miriam mpid
N2T Name-to-Thing logo n2t mpid
Prefix Commons Prefix Commons logo prefixcommons mpi

Providers are various services that resolve CURIEs to URLs. The example CURIE mpid:172 is used to demonstrate the provides available for mpid. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Microbial Protein Interaction Database mpid
Bioregistry bioregistry miriam
Name-to-Thing n2t
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF
ebi Microbial Protein Interaction Database subset through IntAct