Registry Microbial Protein Interaction Database
The microbial protein interaction database (MPIDB) provides physical microbial interaction data. The interactions are manually curated from the literature or imported from other databases, and are linked to supporting experimental evidence, as well as evidences based on interaction conservation, protein complex membership, and 3D domain contacts.
- Prefix
mpid- Alternative Prefixes
- mpidb
- Keywords
- interaction life science protein small molecule
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in Microbial Protein Interaction Database should match this regular expression:
^\d+$ - Example Local Unique Identifier
- 172 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Microbial Protein Interaction Database should match this regular expression:
^mpid:\d+$ - Example CURIE
- mpid:172
- Publications
- 2008 MPIDB: the microbial protein interaction database.
Metaregistry Microbial Protein Interaction Database
The metaregistry provides mappings between the Bioregistry and other registries. There are
5 mappings to external registries for mpid with
3 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
MPID
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.eyjkws
|
|
Identifiers.org
|
miriam |
mpid
|
|
N2T
|
n2t |
mpid
|
|
Prefix Commons
|
prefixcommons |
mpi
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
mpid:172
is used to demonstrate the provides available for
mpid. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Extra Providers
Additional providers curated in the Bioregistry are listed here.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/mpi:172 |
ebi |
Microbial Protein Interaction Database subset through IntAct | https://www.ebi.ac.uk/intact/query/interaction_id:MPIDB-INT-172 |