The microbial protein interaction database (MPIDB) provides physical microbial interaction data. The interactions are manually curated from the literature or imported from other databases, and are linked to supporting experimental evidence, as well as evidences based on interaction conservation, protein complex membership, and 3D domain contacts.
mpid
Local identifiers in Microbial Protein Interaction Database should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from Microbial Protein Interaction Database should match
this regular expression:
^mpid:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 4 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
MPID
|
|
FAIRSharing | fairsharing |
FAIRsharing.eyjkws
|
|
Identifiers.org | miriam |
mpid
|
|
N2T | n2t |
mpid
|
|
Pathguide | pathguide |
559
|
|
Prefix Commons | prefixcommons |
mpi
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 172
is used to demonstrate the providers
available for Microbial Protein Interaction Database. A guide for curating additional providers can be found
here.
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/mpi:172 |
ebi |
Microbial Protein Interaction Database subset through IntAct | https://www.ebi.ac.uk/intact/query/interaction_id:MPIDB-INT-172 |