appears_in: []
contributor_extras:
- email: benjamin_gyori@hms.harvard.edu
  github: bgyori
  name: Benjamin M. Gyori
  orcid: 0000-0001-9439-5346
- email: cthoyt@gmail.com
  github: cthoyt
  name: Charles Tapley Hoyt
  orcid: 0000-0003-4423-4370
depends_on: []
deprecated: true
description: miRTarBase is a database of miRNA-target interactions (MTIs), collected
  manually from relevant literature, following Natural Language Processing of the
  text to identify research articles related to functional studies of miRNAs. Generally,
  the collected MTIs are validated experimentally by reporter assay, western blot,
  microarray and next-generation sequencing experiments.
example: MIRT000002
example_extras: []
homepage: https://mirtarbase.cuhk.edu.cn/
keywords:
- genome/gene
- image/movie
- interaction/pathway
- rna
- sequence
mappings:
  biocontext: MIRTARBASE
  integbio: nbdc01217
  miriam: mirtarbase
  n2t: mirtarbase
  pathguide: '715'
  wikidata: P2646
name: mirTarBase
namespace_in_lui: false
pattern: ^MIRT\d{6}$
preferred_prefix: mirtarbase
prefix: mirtarbase
providers: []
publications:
- doi: 10.1093/nar/gkab1079
  pmc: PMC8728135
  pubmed: '34850920'
  title: 'miRTarBase update 2022: an informative resource for experimentally validated
    miRNA–target interactions'
  year: 2022
- doi: 10.1093/nar/gkz896
  pmc: PMC7145596
  pubmed: '31647101'
  title: 'miRTarBase 2020: updates to the experimentally validated microRNA-target
    interaction database'
  year: 2020
- doi: 10.1093/nar/gkx1067
  pmc: PMC5753222
  pubmed: '29126174'
  title: 'miRTarBase update 2018: a resource for experimentally validated microRNA-target
    interactions'
  year: 2018
- doi: 10.1093/nar/gkv1258
  pmc: PMC4702890
  pubmed: '26590260'
  title: 'miRTarBase 2016: updates to the experimentally validated miRNA-target interactions
    database'
  year: 2016
- doi: 10.1093/nar/gkt1266
  pmc: PMC3965058
  pubmed: '24304892'
  title: 'miRTarBase update 2014: an information resource for experimentally validated
    miRNA-target interactions'
  year: 2014
- doi: 10.1093/nar/gkq1107
  pmc: PMC3013699
  pubmed: '21071411'
  title: 'miRTarBase: a database curates experimentally validated microRNA-target
    interactions'
  year: 2010
references:
- https://github.com/biopragmatics/bioregistry/pull/940
synonyms: []
uri_format: https://mirtarbase.cuhk.edu.cn/~miRTarBase/miRTarBase_2022/php/detail.php?mirtid=$1
