The Ligand-Gated Ion Channel database provides nucleic and proteic sequences of the subunits of ligand-gated ion channels. These transmembrane proteins can exist under different conformations, at least one of which forms a pore through the membrane connecting two neighbouring compartments. The database can be used to generate multiple sequence alignments from selected subunits, and gives the atomic coordinates of subunits, or portion of subunits, where available.

Comment

Website is gone

Prefix

lgic

Keywords

gene protein sequence

License

http://www.ebi.ac.uk/Information/termsofuse.html

Links

Homepage

Publications

1999 The Ligand Gated Ion Channel Database

Pattern for Local Unique Identifiers

Local identifiers in Ligand-Gated Ion Channel database should match this regular expression:
^\w+$

Example Local Unique Identifier

5HT3Arano   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Ligand-Gated Ion Channel database should match this regular expression:
^lgic:\w+$

Example CURIE

lgic:5HT3Arano

Contact

Missing Contact

Identifier Space Owner

European Bioinformatics Institute

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 4 mappings to external registries with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 5HT3Arano is used to demonstrate the providers available for Ligand-Gated Ion Channel database. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.