IMGT, the international ImMunoGeneTics project, is a collection of high-quality integrated databases specialising in Immunoglobulins, T cell receptors and the Major Histocompatibility Complex (MHC) of all vertebrate species. IMGT/HLA is a database for sequences of the human MHC, referred to as HLA. It includes all the official sequences for the WHO Nomenclature Committee For Factors of the HLA System. This collection references allele information through the WHO nomenclature.
imgt.hla
Local identifiers in IMGT/HLA human major histocompatibility complex sequence database should match this
regular expression:
^[A-Z0-9*:]+$
Compact URIs (CURIEs) constructed from IMGT/HLA human major histocompatibility complex sequence database should match
this regular expression:
^imgt\.hla:[A-Z0-9*:]+$
A summary of the relations in the Bioregistry schema can be found here.
The metaregistry provides mappings between the Bioregistry and other registries. There are 11 mappings to external registries for this resource with 9 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
IMGT.HLA
|
|
Cellosaurus | cellosaurus |
IPD-IMGT/HLA
|
|
EDAM | edam |
2773
|
|
FAIRSharing | fairsharing |
FAIRsharing.e28v7g
|
|
GO | go |
IMGT_HLA
|
|
Integbio | integbio |
nbdc00106
|
|
Identifiers.org | miriam |
imgt.hla
|
|
N2T | n2t |
imgt.hla
|
|
NCBI | ncbi |
IMGT/HLA
|
|
Prefix Commons | prefixcommons |
imgthla
|
|
re3data | re3data |
r3d100010804
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
imgt.hla:A*01:01:01:01
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/imgthla:A*01:01:01:01 |