biocontext:
  is_identifiers: true
  is_obo: false
  prefix: GIARDIADB
  uri_format: http://identifiers.org/giardiadb/$1
fairsharing:
  abbreviation: GiardiaDB
  description: A detailed study of Giardia lamblia's genome will provide insights
    into an early evolutionary stage of eukaryotic chromosome organization as well
    as other aspects of the prokaryotic / eukaryotic divergence.
  homepage: http://giardiadb.org
  license: http://opendatacommons.org/licenses/pddl/1.0
  name: GiardiaDB
  prefix: FAIRsharing.e7skwg
  publications:
  - doi: 10.1093/nar/gkn631
    pubmed_id: 18824479
    title: 'GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic
      protist pathogens Giardia lamblia and Trichomonas vaginalis.'
  subjects:
  - Genomics
  twitter: EuPathDB
mappings:
  biocontext: GIARDIADB
  fairsharing: FAIRsharing.e7skwg
  miriam: giardiadb
  n2t: giardiadb
  prefixcommons: giardiadb
  re3data: r3d100012458
miriam:
  deprecated: false
  description: GiardiaDB is one of the databases that can be accessed through the
    EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens
    of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma,
    Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific
    database built upon the same infrastructure, the EuPathDB portal offers an entry
    point to all these resources, and the opportunity to leverage orthology for searches
    across genera.
  homepage: https://giardiadb.org/giardiadb/
  id: '00000151'
  name: GiardiaDB
  namespaceEmbeddedInLui: false
  pattern: ^\w+$
  prefix: giardiadb
  sampleId: GL50803_102438
  uri_format: https://giardiadb.org/giardiadb/app/record/gene/$1
n2t:
  description: GiardiaDB is one of the databases that can be accessed through the
    EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens
    of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma,
    Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific
    database built upon the same infrastructure, the EuPathDB portal offers an entry
    point to all these resources, and the opportunity to leverage orthology for searches
    across genera.
  example: GL50803_102438
  homepage: https://giardiadb.org/giardiadb/
  name: GiardiaDB at EuPathDB
  namespaceEmbeddedInLui: false
  pattern: ^\w+$
  prefix: giardiadb
  uri_format: https://giardiadb.org/giardiadb/app/record/gene/$1
prefixcommons:
  description: A detailed study of Giardia lamblia's genome will provide insights
    into an early evolutionary stage of eukaryotic chromosome organization as well
    as other aspects of the prokaryotic / eukaryotic divergence.
  example: GL50803_102438
  homepage: http://giardiadb.org
  keywords:
  - eukaryotic
  - genome
  name: GiardiaDB
  pattern: ^GL\d+_\d+$
  prefix: giardiadb
  pubmed_ids:
  - '18824479'
  uri_format: http://giardiadb.org/giardiadb/showRecord.do?name=GeneRecordClasses.GeneRecordClass&primary_key=$1
publications:
- doi: 10.1093/nar/gkn631
  pmc: PMC2686445
  pubmed: '18824479'
  title: 'GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist
    pathogens Giardia lamblia and Trichomonas vaginalis.'
  year: 2008
- doi: 10.1093/nar/gkn631
  pubmed: '18824479'
  title: 'GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist
    pathogens Giardia lamblia and Trichomonas vaginalis.'
- pubmed: '18824479'
- doi: 10.1093/nar/gkn631
  pubmed: '18824479'
  title: 'GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist
    pathogens Giardia lamblia and Trichomonas vaginalis.'
- pubmed: '18824479'
- doi: 10.1093/nar/gkn631
  pubmed: '18824479'
  title: 'GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist
    pathogens Giardia lamblia and Trichomonas vaginalis.'
- pubmed: '18824479'
re3data:
  description: 'Giardia lamblia is a significant, environmentally transmitted, human
    pathogen and an amitochondriate protist. It is a major contributor to the enormous
    worldwide burden of human diarrheal diseases, yet the basic biology of this parasite
    is not well understood. No virulence factor has been identified. The Giardia lamblia
    genome contains only 12 million base pairs distributed onto five chromosomes.
    Its analysis promises to provide insights about the origins of nuclear genome
    organization, the metabolic pathways used by parasitic protists, and the cellular
    biology of host interaction and avoidance of host immune systems.


    Since the divergence of Giardia lamblia lies close to the transition between eukaryotes
    and prokaryotes in universal ribosomal RNA phylogenies, it is a valuable, if not
    unique, model for gaining basic insights into genetic innovations that led to
    formation of eukaryotic cells. In evolutionary terms, the divergence of this organism
    is at least twice as ancient as the common ancestor for yeast and man. A detailed
    study of its genome will provide insights into an early evolutionary stage of
    eukaryotic chromosome organization as well as other aspects of the prokaryotic
    / eukaryotic divergence.'
  homepage: http://giardiadb.org/giardiadb/
  name: GiardiaDB
  prefix: r3d100012458
  xrefs:
    fairsharing: FAIRsharing.e7skwg
    miriam: '00000151'
    nif: 0000-02908
    omics: '03161'
    scr: '013377'