An experimental run, served thrugh the ENA

Comment

https://www.insdc.org/ is the authoritative source for INSDC. However, confusingly, they don't mention runs in this table. I think we should ask them to include. ENA is a partner and they have documentation here: https://ena-docs.readthedocs.io/en/latest/submit/general-guide/accessions.html Runs | (E\|D\|S)RR[0-9]{6,} | ERR123456 -- | -- | --

Prefix

insdc.run

Links

Homepage Request Discussion

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in International Nucleotide Sequence Database Collaboration (INSDC) Run should match this regular expression:
^(E|D|S)RR[0-9]{6,}$

Example Local Unique Identifier

ERR436051   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from International Nucleotide Sequence Database Collaboration (INSDC) Run should match this regular expression:
^insdc\.run:(E|D|S)RR[0-9]{6,}$

Example CURIE

insdc.run:ERR436051

Contributors

• submitter Chris Mungall   0000-0002-6601-2165   cmungall

Reviewer

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

Has Canonical

ena.embl

Providers are various services that resolve CURIEs to URLs. The example CURIE insdc.run:ERR436051 is used to demonstrate the provides available for insdc.run. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.