The CATH database is a hierarchical domain classification of protein structures in the Protein Data Bank. Protein structures are classified using a combination of automated and manual procedures. There are four major levels in this hierarchy; Class (secondary structure classification, e.g. mostly alpha), Architecture (classification based on overall shape), Topology (fold family) and Homologous superfamily (protein domains which are thought to share a common ancestor). This colelction is concerned with superfamily classification.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in CATH superfamily should match this regular expression:

Example Local Unique Identifier   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from CATH superfamily should match this regular expression:

Example CURIE

A summary of the relations in the Bioregistry schema can be found here.

Part Of (bfo:0000050 )
Metaregistry CATH superfamily

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext CATH.SUPERFAMILY logo miriam cath.superfamily
N2T Name-to-Thing logo n2t cath.superfamily

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier is used to demonstrate the providers available for CATH superfamily. A guide for curating additional providers can be found here.

Name Metaprefix URI
CATH superfamily cath.superfamily
Bioregistry bioregistry miriam
Name-to-Thing n2t