BioGRID is a database of physical and genetic interactions in Saccharomyces cerevisiae, Caenorhabditis elegans, Drosophila melanogaster, Homo sapiens, and Schizosaccharomyces pombe.

biochemistry bioinformatics chemical biology cheminformatics gene interaction life science protein proteomics systems biology
Homepage Repository @biogrid
Mike Tyers   0000-0002-9713-9994
Pattern for Local Unique Identifiers

Local identifiers in BioGRID should match this regular expression:

Example Local Unique Identifier
31623   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from BioGRID should match this regular expression:

Example CURIE

A summary of the relations in the Bioregistry schema can be found here.

Has Parts (bfo:0000051 )
Metaregistry BioGRID

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext BIOGRID
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.9d5f5r logo miriam biogrid
N2T Name-to-Thing logo n2t biogrid
Prefix Commons Prefix Commons logo prefixcommons biogrid
re3data Registry of Research Data Repositories logo re3data r3d100010350
UniProt UniProt Cross-ref database logo uniprot DB-0184

Providers are various services that resolve CURIEs to URLs. The example CURIE biogrid:31623 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
BioGRID biogrid
Bioregistry bioregistry miriam
Name-to-Thing n2t
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF