BioGRID is a database of physical and genetic interactions in Saccharomyces cerevisiae, Caenorhabditis elegans, Drosophila melanogaster, Homo sapiens, and Schizosaccharomyces pombe.

Prefix
biogrid
Keywords
biochemistry bioinformatics chemical biology cheminformatics gene interaction life science protein proteomics systems biology
Links
Homepage Repository @biogrid
Contact
Mike Tyers   0000-0002-9713-9994
Pattern for Local Unique Identifiers

Local identifiers in BioGRID should match this regular expression:
^\d+$

Example Local Unique Identifier
31623   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from BioGRID should match this regular expression:
^biogrid:\d+$

Example CURIE
biogrid:31623
Publications
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Has Parts (bfo:0000051 )
biogrid.interaction
Metaregistry BioGRID

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext BIOGRID
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.9d5f5r
Identifiers.org Identifiers.org logo miriam biogrid
N2T Name-to-Thing logo n2t biogrid
Prefix Commons Prefix Commons logo prefixcommons biogrid
re3data Registry of Research Data Repositories logo re3data r3d100010350
UniProt UniProt Cross-ref database logo uniprot DB-0184
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE biogrid:31623 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
BioGRID biogrid http://thebiogrid.org/31623
Bioregistry bioregistry https://bioregistry.io/biogrid:31623
Identifiers.org miriam https://identifiers.org/biogrid:31623
Name-to-Thing n2t https://n2t.net/biogrid:31623
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/biogrid:31623