BindingDB is the first public database of protein-small molecule affinity data.
bindingdb
Local identifiers in BindingDB should match this
regular expression:
^\w\d+$
Compact URIs (CURIEs) constructed from BindingDB should match
this regular expression:
^bindingdb:\w\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
7 mappings to external registries for bindingdb
with
4 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
BINDINGDB
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.3b36hk
|
|
Identifiers.org
![]() |
miriam |
bindingdb
|
|
Name-to-Thing
![]() |
n2t |
bindingdb
|
|
Prefix Commons | prefixcommons |
bindingdb
|
|
Registry of Research Data Repositories | re3data |
r3d100012074
|
|
UniProt Cross-ref database | uniprot |
DB-0127
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
bindingdb:e999
is used to demonstrate the provides available for
bindingdb
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
BindingDB | bindingdb |
http://www.bindingdb.org/compact/e999 |
Bioregistry | bioregistry |
https://bioregistry.io/bindingdb:e999 |
Identifiers.org | miriam |
https://identifiers.org/bindingdb:e999 |
Name-to-Thing | n2t |
https://n2t.net/bindingdb:e999 |