ArrayExpress is a public repository for microarray data, which is aimed at storing MIAME-compliant data in accordance with Microarray Gene Expression Data (MGED) recommendations.

Prefix

arrayexpress

Keywords

expression functional genomics microarray nucleotide

Links

Homepage @ArrayExpressEBI

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in ArrayExpress should match this regular expression:
^[AEP]-\w{4}-\d+$

Example Local Unique Identifier

E-MEXP-1712   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from ArrayExpress should match this regular expression:
^arrayexpress:[AEP]-\w{4}-\d+$

Example CURIE

arrayexpress:E-MEXP-1712

Publications

• 2019 ArrayExpress update - from bulk to single-cell expression data.
• 2014 ArrayExpress update--simplifying data submissions.
• 2003 ArrayExpress--a public repository for microarray gene expression data at the EBI.

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for arrayexpress with 3 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE arrayexpress:E-MEXP-1712 is used to demonstrate the provides available for arrayexpress. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Additional providers curated in the Bioregistry are listed here.