ArrayExpress is a public repository for microarray data, which is aimed at storing MIAME-compliant data in accordance with Microarray Gene Expression Data (MGED) recommendations.
arrayexpress
Local identifiers in ArrayExpress should match this
regular expression:
^[AEP]-\w{4}-\d+$
Compact URIs (CURIEs) constructed from ArrayExpress should match
this regular expression:
^arrayexpress:[AEP]-\w{4}-\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for arrayexpress.
| Registry Name | Metaprefix | External Prefix |
|---|---|---|
| Cellosaurus Registry | cellosaurus |
ArrayExpress
|
| Identifiers.org | miriam |
arrayexpress
|
| Name-to-Thing | n2t |
arrayexpress
|
| Prefix Commons | prefixcommons |
ARRAYEXPRESS
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
arrayexpress:E-MEXP-1712 is used to demonstrate the provides available for
arrayexpress. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| ArrayExpress | arrayexpress |
https://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-1712 |
| Bioregistry | bioregistry |
https://bioregistry.io/arrayexpress:E-MEXP-1712 |
| Identifiers.org | miriam |
https://identifiers.org/arrayexpress:E-MEXP-1712 |
| Name-to-Thing | n2t |
https://n2t.net/arrayexpress:E-MEXP-1712 |
Additional providers curated in the Bioregistry are listed here.
| Code | Name | URL |
|---|---|---|
| omicsdi | ArrayExpress through OmicsDI | https://www.omicsdi.org/dataset/arrayexpress-repository/E-MEXP-1712 |