ArrayExpress is a public repository for microarray data, which is aimed at storing MIAME-compliant data in accordance with Microarray Gene Expression Data (MGED) recommendations.

Prefix
arrayexpress
Keywords
expression functional genomics microarray nucleotide
Links
Homepage @ArrayExpressEBI
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in ArrayExpress should match this regular expression:
^[AEP]-\w{4}-\d+$

Example Local Unique Identifier
E-MEXP-1712   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from ArrayExpress should match this regular expression:
^arrayexpress:[AEP]-\w{4}-\d+$

Example CURIE
arrayexpress:E-MEXP-1712
Publications
Metaregistry ArrayExpress

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for arrayexpress with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext ARRAYEXPRESS
Cellosaurus Registry cellosaurus ArrayExpress
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.6k0kwd
Identifiers.org Identifiers.org logo miriam arrayexpress
Name-to-Thing Name-to-Thing logo n2t arrayexpress
Prefix Commons prefixcommons arrayexpress
Registry of Research Data Repositories re3data r3d100010222
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE arrayexpress:E-MEXP-1712 is used to demonstrate the provides available for arrayexpress. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
ArrayExpress arrayexpress https://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-1712
Bioregistry bioregistry https://bioregistry.io/arrayexpress:E-MEXP-1712
Identifiers.org miriam https://identifiers.org/arrayexpress:E-MEXP-1712
Name-to-Thing n2t https://n2t.net/arrayexpress:E-MEXP-1712
None omicsdi https://www.omicsdi.org/dataset/arrayexpress-repository/E-MEXP-1712
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
omicsdi ArrayExpress through OmicsDI https://www.omicsdi.org/dataset/arrayexpress-repository/E-MEXP-1712