appears_in: []
contact:
  email: brazma@ebi.ac.uk
  name: Alvis Brazma
  orcid: 0000-0001-5988-7409
contributor_extras:
- email: sumirp77@gmail.com
  github: sumirp
  name: Sumir H Pandit
  orcid: 0000-0002-1216-4761
depends_on: []
deprecated: false
description: ArrayExpress is a public repository for microarray data, which is aimed
  at storing MIAME-compliant data in accordance with Microarray Gene Expression Data
  (MGED) recommendations.
example: E-MEXP-1712
homepage: https://www.ebi.ac.uk/arrayexpress/
keywords:
- expression
- functional genomics
- microarray
- nucleotide
mappings:
  biocontext: ARRAYEXPRESS
  cellosaurus: ArrayExpress
  fairsharing: FAIRsharing.6k0kwd
  integbio: nbdc00009
  miriam: arrayexpress
  n2t: arrayexpress
  prefixcommons: arrayexpress
  re3data: r3d100010222
name: ArrayExpress
namespace_in_lui: false
pattern: ^[AEP]-\w{4}-\d+$
preferred_prefix: arrayexpress
prefix: arrayexpress
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/arrayexpress:$1
- code: omicsdi
  description: ArrayExpress through OmicsDI
  homepage: https://www.omicsdi.org/
  name: ArrayExpress through OmicsDI
  uri_format: https://www.omicsdi.org/dataset/arrayexpress-repository/$1
publications:
- doi: 10.1093/nar/gky964
  pmc: PMC6323929
  pubmed: '30357387'
  title: ArrayExpress update - from bulk to single-cell expression data
  year: 2019
- doi: 10.1093/nar/gku1057
  pmc: PMC4383899
  pubmed: '25361974'
  title: ArrayExpress update--simplifying data submissions
  year: 2014
- doi: 10.1093/nar/gkg091
  pmc: PMC165538
  pubmed: '12519949'
  title: ArrayExpress--a public repository for microarray gene expression data at
    the EBI
  year: 2003
references:
- https://github.com/biopragmatics/bioregistry/pull/1141
synonyms: []
twitter: ArrayExpressEBI
uri_format: https://www.ebi.ac.uk/arrayexpress/experiments/$1
