The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository that provides protein and peptide identifications together with supporting evidence. This collection references projects.

Prefix
pride.project
Links
Homepage
Identifier Standards
Pattern for Local Unique Identifiers

Local identifiers in PRIDE Project should match this regular expression:
^P(X|R|A)D\d{6}$

Example Local Unique Identifier
PXD000440   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from PRIDE Project should match this regular expression:
^pride\.project:P(X|R|A)D\d{6}$

Example CURIE
pride.project:PXD000440
Contacts
Contact
Missing Contact
Ontology

A summary of the relations in the Bioregistry schema can be found here.

In Collection (1)
Synapse.org external links
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 4 mappings to external registries with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext PRIDE.PROJECT
Cellosaurus Cellosaurus Registry logo cellosaurus PRIDE
Identifiers.org Identifiers.org logo miriam pride.project
N2T Name-to-Thing logo n2t pride.project
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier PXD000440 is used to demonstrate the providers available for PRIDE Project. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
PRIDE Project pride.project https://www.ebi.ac.uk/pride/archive/projects/PXD000440
Bioregistry bioregistry https://bioregistry.io/pride.project:PXD000440
Identifiers.org miriam https://identifiers.org/pride.project:PXD000440
Name-to-Thing n2t https://n2t.net/pride.project:PXD000440
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Provider Name Provider Code URL
PRIDE Project through OmicsDI omicsdi https://www.omicsdi.org/dataset/pride/PXD000440