The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository that provides protein and peptide identifications together with supporting evidence. This collection references projects.
pride.project
Local identifiers in PRIDE Project should match this
regular expression:
^P(X|R)D\d{6}$
Compact URIs (CURIEs) constructed from PRIDE Project should match
this regular expression:
^pride\.project:P(X|R)D\d{6}$
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PRIDE.PROJECT
|
|
Cellosaurus | cellosaurus |
PRIDE
|
|
Identifiers.org | miriam |
pride.project
|
|
N2T | n2t |
pride.project
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
pride.project:PXD000440
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
PRIDE Project | pride.project |
https://www.ebi.ac.uk/pride/archive/projects/PXD000440 |
Bioregistry | bioregistry |
https://bioregistry.io/pride.project:PXD000440 |
Identifiers.org | miriam |
https://identifiers.org/pride.project:PXD000440 |
Name-to-Thing | n2t |
https://n2t.net/pride.project:PXD000440 |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
omicsdi |
PRIDE Project through OmicsDI | https://www.omicsdi.org/dataset/pride/PXD000440 |