The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository that provides protein and peptide identifications together with supporting evidence. This collection references projects.
pride.project
Local identifiers in PRIDE Project should match this
regular expression:
^P(X|R|A)D\d{6}$
Compact URIs (CURIEs) constructed from PRIDE Project should match
this regular expression:
^pride\.project:P(X|R|A)D\d{6}$
A summary of the relations in the Bioregistry schema can be found here.
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
PRIDE.PROJECT
|
|
Cellosaurus
|
cellosaurus |
PRIDE
|
|
Identifiers.org
|
miriam |
pride.project
|
|
N2T
|
n2t |
pride.project
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier PXD000440 is used to demonstrate the providers
available for PRIDE Project. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| PRIDE Project | pride.project |
https://www.ebi.ac.uk/pride/archive/projects/PXD000440 |
| Bioregistry | bioregistry |
https://bioregistry.io/pride.project:PXD000440 |
| Identifiers.org | miriam |
https://identifiers.org/pride.project:PXD000440 |
| Name-to-Thing | n2t |
https://n2t.net/pride.project:PXD000440 |
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
omicsdi |
PRIDE Project through OmicsDI | https://www.omicsdi.org/dataset/pride/PXD000440 |